Development¶
The following documentation is intended for people that want to use cameo to develop new methods and/or that would like to contribute to its development.
Importing a model¶
cobrapy (load a model in SBML format):
from cobra.io import read_sbml_model
model = read_sbml_model('path/to/model.xml')
cameo (load models from different formats):
from cameo import load_model
# read SBML model
model = load_model('path/to/model.xml')
# ... or read a pickled model
model = load_model('path/to/model.pickle')
# ... or just import a model by ID from http://darwin.di.uminho.pt/models
iAF1260 = load_model('iAF1260')
Furthermore, cameo provides direct access to a number of other models through cameo.models
.
from cameo import models
models.e_coli_core.solve().f